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    • Modeling Spatial Correlation of DNA Deformation: DNA Allostery in Protein Binding 

      Xu, Xinliang; Ge, Hao; Gu, Chan; Gao, Yi Qin; Wang, Siyuan S.; Thio, Beng Joo Reginald; Hynes, James T.; Xie, Xiaoliang Sunney; Cao, Jianshu (American Chemical Society, 2013)
      We report a study of DNA deformations using a coarse-grained mechanical model and quantitatively interpret the allosteric effects in protein–DNA binding affinity. A recent single-molecule study (Kim et al. Science 2013, ...