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Computing DNA Duplex Instability Profiles Efficiently with a Two-State Model: Trends of Promoters and Binding Sites

Kantorovitz, Miriam R; Rapti, Zoi; Usheva, Anny; Gelev, Vladimir (BMC Bioinformatics, 2010) Link to Published Version
DNA Dynamics Play a Role as a Basal Transcription Factor in the Positioning and Regulation of Gene Transcription Initiation

Alexandrov, Boian S.; Alexandrov, Ludmil B.; Fukuyo, Yayoi; Bishop, Alan R.; Rasmussen, Kim Ø.; Usheva, Anny; Gelev, Vladimir et al. (Nucleic Acids Research, 2009) Link to Published Version
A Nonlinear Dynamic Model of DNA with a Sequence-Dependent Stacking Term

Alexandrov, Boian S.; Monisova, Yevgeniya; Alexandrov, Ludmil B.; Bishop, Alan R.; Rasmussen, Kim Ø.; Usheva, Anny; Gelev, Vladimir (Nucleic Acids Research, 2009) Link to Published Version

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