rtracklayer: an R package for interfacing with genome browsers

DSpace/Manakin Repository

rtracklayer: an R package for interfacing with genome browsers

Citable link to this page

. . . . . .

Title: rtracklayer: an R package for interfacing with genome browsers
Author: Gentleman, Robert; Lawrence, Michael; Carey, Vincent James

Note: Order does not necessarily reflect citation order of authors.

Citation: Lawrence, Michael, Robert Gentleman, and Vincent Carey. 2009. rtracklayer: an R package for interfacing with genome browsers. Bioinformatics 25(14): 1841-1842.
Full Text & Related Files:
Abstract: Summary: The rtracklayer package supports the integration of existing genome browsers with experimental data analyses performed in R. The user may (i) transfer annotation tracks to and from a genome browser and (ii) create and manipulate browser views to focus on a particular set of annotations in a specific genomic region. Currently, the UCSC genome browser is supported. Availability: The package is freely available from http://www.bioconductor.org/. A quick-start vignette is included with the package. Contact: mflawren@fhcrc.org
Published Version: doi:10.1093/bioinformatics/btp328
Other Sources: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2705236/pdf/
Terms of Use: This article is made available under the terms and conditions applicable to Other Posted Material, as set forth at http://nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of-use#LAA
Citable link to this page: http://nrs.harvard.edu/urn-3:HUL.InstRepos:4885950

Show full Dublin Core record

This item appears in the following Collection(s)

 
 

Search DASH


Advanced Search
 
 

Submitters