Now showing items 1-6 of 6

    • Automating Open Science for Big Data 

      Crosas, Merce; King, Gary; Honaker, James Allen; Sweeney, Latanya (SAGE Publications, 2015)
      The vast majority of social science research presently uses small (MB or GB scale) data sets. These fixed scale sets are commonly downloaded to the researcher's computer where the analysis is performed locally, and are ...
    • Data publication with the structural biology data grid supports live analysis 

      Meyer, Peter A.; Socias, Stephanie; Key, Jason; Ransey, Elizabeth; Tjon, Emily C.; Buschiazzo, Alejandro; Lei, Ming; Botka, Chris; Withrow, James; Neau, David; Rajashankar, Kanagalaghatta; Anderson, Karen S.; Baxter, Richard H.; Blacklow, Stephen C.; Boggon, Titus J.; Bonvin, Alexandre M. J. J.; Borek, Dominika; Brett, Tom J.; Caflisch, Amedeo; Chang, Chung-I; Chazin, Walter J.; Corbett, Kevin D.; Cosgrove, Michael S.; Crosson, Sean; Dhe-Paganon, Sirano; Di Cera, Enrico; Drennan, Catherine L.; Eck, Michael J.; Eichman, Brandt F.; Fan, Qing R.; Ferré-D'Amaré, Adrian R.; Christopher Fromme, J.; Garcia, K. Christopher; Gaudet, Rachelle; Gong, Peng; Harrison, Stephen C.; Heldwein, Ekaterina E.; Jia, Zongchao; Keenan, Robert J.; Kruse, Andrew C.; Kvansakul, Marc; McLellan, Jason S.; Modis, Yorgo; Nam, Yunsun; Otwinowski, Zbyszek; Pai, Emil F.; Pereira, Pedro José Barbosa; Petosa, Carlo; Raman, C. S.; Rapoport, Tom A.; Roll-Mecak, Antonina; Rosen, Michael K.; Rudenko, Gabby; Schlessinger, Joseph; Schwartz, Thomas U.; Shamoo, Yousif; Sondermann, Holger; Tao, Yizhi J.; Tolia, Niraj H.; Tsodikov, Oleg V.; Westover, Kenneth D.; Wu, Hao; Foster, Ian; Fraser, James S.; Maia, Filipe R. N C.; Gonen, Tamir; Kirchhausen, Tom; Diederichs, Kay; Crosas, Mercè; Sliz, Piotr (Nature Publishing Group, 2016)
      Access to experimental X-ray diffraction image data is fundamental for validation and reproduction of macromolecular models and indispensable for development of structural biology processing methods. Here, we established ...
    • How Do Astronomers Share Data? Reliability and Persistence of Datasets Linked in AAS Publications and a Qualitative Study of Data Practices among US Astronomers 

      Pepe, Alberto; Goodman, Alyssa; Muench, August; Crosas, Merce; Erdmann, Christopher (Public Library of Science, 2014)
      We analyze data sharing practices of astronomers over the past fifteen years. An analysis of URL links embedded in papers published by the American Astronomical Society reveals that the total number of links included in ...
    • If these data could talk 

      Pasquier, Thomas; Lau, Matthew; Trisovic, Ana; Boose, Emery Robert; Couturier, Ben; Crosas, Merce; Ellison, Aaron M.; Gibson, Valerie; Jones, Chris R.; Seltzer, Margo I. (Springer Nature, 2017)
      In the last few decades, data-driven methods have come to dominate many fields of scientific inquiry. Open data and open-source software have enabled the rapid implementation of novel methods to manage and analyze the ...
    • Repository Approaches to Improving the Quality of Shared Data and Code 

      Trisovic, Ana; Mika, Katherine; Boyd, Ceilyn; Feger, Sebastian; Crosas, Merce (MDPI AG, 2021-02-03)
      Sharing data and code for reuse has become increasingly important in scientific work over the past decade. However, in practice, shared data and code may be unusable, or published results obtained from them may be ...
    • Ten Simple Rules for the Care and Feeding of Scientific Data 

      Goodman, Alyssa; Pepe, Alberto; Blocker, Alexander; Borgman, Christine L.; Cranmer, Kyle; Crosas, Merce; Di Stefano, Rosanne; Gil, Yolanda; Groth, Paul; Hedstrom, Margaret H.; Hogg, David W.; Kashyap, Vinay L.; Mahabal, Ashish; Siemiginowska, Aneta L.; Slavkovic, Aleksandra (Public Library of Science (PLoS), 2014)