GenoBase: comprehensive resource database of Escherichia coli K-12

View/ Open
Author
Otsuka, Yuta
Muto, Ai
Takeuchi, Rikiya
Okada, Chihiro
Ishikawa, Motokazu
Nakamura, Koichiro
Yamamoto, Natsuko
Dose, Hitomi
Nakahigashi, Kenji
Tanishima, Shigeki
Suharnan, Sivasundaram
Nomura, Wataru
Nakayashiki, Toru
Aref, Walid G.
Bochner, Barry R.
Conway, Tyrrell
Gribskov, Michael
Kihara, Daisuke
Rudd, Kenneth E.
Tohsato, Yukako
Mori, Hirotada
Note: Order does not necessarily reflect citation order of authors.
Published Version
https://doi.org/10.1093/nar/gku1164Metadata
Show full item recordCitation
Otsuka, Y., A. Muto, R. Takeuchi, C. Okada, M. Ishikawa, K. Nakamura, N. Yamamoto, et al. 2015. “GenoBase: comprehensive resource database of Escherichia coli K-12.” Nucleic Acids Research 43 (Database issue): D606-D617. doi:10.1093/nar/gku1164. http://dx.doi.org/10.1093/nar/gku1164.Abstract
Comprehensive experimental resources, such as ORFeome clone libraries and deletion mutant collections, are fundamental tools for elucidation of gene function. Data sets by omics analysis using these resources provide key information for functional analysis, modeling and simulation both in individual and systematic approaches. With the long-term goal of complete understanding of a cell, we have over the past decade created a variety of clone and mutant sets for functional genomics studies of Escherichia coli K-12. We have made these experimental resources freely available to the academic community worldwide. Accordingly, these resources have now been used in numerous investigations of a multitude of cell processes. Quality control is extremely important for evaluating results generated by these resources. Because the annotation has been changed since 2005, which we originally used for the construction, we have updated these genomic resources accordingly. Here, we describe GenoBase (http://ecoli.naist.jp/GB/), which contains key information about comprehensive experimental resources of E. coli K-12, their quality control and several omics data sets generated using these resources.Other Sources
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383962/pdf/Terms of Use
This article is made available under the terms and conditions applicable to Other Posted Material, as set forth at http://nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of-use#LAACitable link to this page
http://nrs.harvard.edu/urn-3:HUL.InstRepos:15034904
Collections
- HMS Scholarly Articles [18278]
Contact administrator regarding this item (to report mistakes or request changes)