Browsing HMS Scholarly Articles by Harvard-affiliated Author "Xavier, Ramnik"

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Browsing HMS Scholarly Articles by Harvard-affiliated Author

Browsing HMS Scholarly Articles by Harvard-affiliated Author "Xavier, Ramnik"

Now showing items 1-20 of 40

Autophagy Controls BCG-Induced Trained Immunity and the Response to Intravesical BCG Therapy for Bladder Cancer

Buffen, Kathrin; Oosting, Marije; Quintin, Jessica; Ng, Aylwin; Kleinnijenhuis, Johanneke; Kumar, Vinod; van de Vosse, Esther et al. (PLoS Pathogens, 2014) Link to Published Version
Bacterial and Host Determinants of MAL Activation upon EPEC Infection: The Roles of Tir, ABRA, and FLRT3

Leong, John M.; Machesky, Laura M.; Heath, Robert John William; Xavier, Ramnik; Visegrády, Balázs (PLoS Pathogens, 2011) Link to Published Version
Complex host genetics influence the microbiome in inflammatory bowel disease

Knights, Dan; Silverberg, Mark S; Weersma, Rinse K; Gevers, Dirk; Dijkstra, Gerard; Huang, Hailiang; Tyler, Andrea D et al. (Genome Medicine, 2014) Link to Published Version
ConStrains identifies microbial strains in metagenomic datasets

Luo, Chengwei; Knight, Rob; Siljander, Heli; Knip, Mikael; Xavier, Ramnik J; Gevers, Dirk (Nature biotechnology, 2015) Link to Published Version
Control and Manipulation of Pathogens with an Optical Trap for Live Cell Imaging of Intercellular Interactions

Castro, Carlos E.; Cardenas, Michael L.; Lang, Matthew J.; Tam, Jenny M.; Heath, Robert John William; Xavier, Ramnik; Vyas, Jatin Mahesh (PLoS ONE, 2010) Link to Published Version
Deep Resequencing of GWAS Loci Identifies Rare Variants in CARD9, IL23R and RNF186 That Are Associated with Ulcerative Colitis

Beaudoin, Mélissa; Goyette, Philippe; Boucher, Gabrielle; Lo, Ken Sin; Rivas, Manuel A.; Stevens, Christine; Alikashani, Azadeh et al. (PLoS Genetics, 2013) Link to Published Version
Discovery of a Small-Molecule Probe for V-ATPase Function

Aldrich, Leslie N.; Kuo, Szu-Yu; Castoreno, Adam B.; Goel, Gautam; Kuballa, Petric; Rees, Matthew G.; Seashore-Ludlow, Brinton A. et al. (Journal of the American Chemical Society, 2015) Link to Published Version
Dissecting the human microbiome with single-cell genomics

Tolonen, Andrew C.; Xavier, Ramnik J. (Genome Medicine, 2017) Link to Published Version
Dysbiosis, inflammation, and response to treatment: a longitudinal study of pediatric subjects with newly diagnosed inflammatory bowel disease

Shaw, Kelly A.; Bertha, Madeline; Hofmekler, Tatyana; Chopra, Pankaj; Vatanen, Tommi; Srivatsa, Abhiram; Prince, Jarod et al. (Genome Medicine, 2016) Link to Published Version
Dysfunction of the Intestinal Microbiome in Inflammatory Bowel Disease and Treatment

Morgan, Xochitl C; Sokol, Harry; Gevers, Dirk; Ward, Doyle V; LeLeiko, Neal; Sands, Bruce E; Tickle, Timothy L. et al. (Genome Biology, 2012) Link to Published Version
Early life environment and natural history of inflammatory bowel diseases

Guo, Abra Y; Stevens, Betsy W; Wilson, Robin G; Russell, Caitlin N; Cohen, Melissa A; Sturgeon, Holly C; Thornton, Anna et al. (BMC Gastroenterology, 2014) Link to Published Version
Fine-mapping inflammatory bowel disease loci to single variant resolution

Huang, Hailiang; Fang, Ming; Jostins, Luke; Mirkov, Maša Umićević; Boucher, Gabrielle; Anderson, Carl A; Andersen, Vibeke et al. (Nature, 2017) Link to Published Version
Functional CRISPR screening identifies the ufmylation pathway as a regulator of SQSTM1/p62

DeJesus, Rowena; Moretti, Francesca; McAllister, Gregory; Wang, Zuncai; Bergman, Phil; Liu, Shanming; Frias, Elizabeth et al. (eLife, 2016) Link to Published Version
Functional genomics identifies negative regulatory nodes controlling phagocyte oxidative burst

Graham, Daniel B.; Becker, Christine E.; Doan, Aivi; Goel, Gautam; Villablanca, Eduardo J.; Knights, Dan; Mok, Amanda et al. (Nature Communications, 2015) Link to Published Version
Functional profiling of the gut microbiome in disease-associated inflammation

Börnigen, Daniela; Morgan, Xochitl C; Franzosa, Eric A; Ren, Boyu; Xavier, Ramnik J; Garrett, Wendy S; Huttenhower, Curtis (Genome Medicine, 2013) Link to Published Version
The Gut Microbiome Contributes to a Substantial Proportion of the Variation in Blood Lipids

Fu, Jingyuan; Bonder, Marc Jan; Cenit, María Carmen; Tigchelaar, Ettje F.; Maatman, Astrid; Dekens, Jackie A.M.; Brandsma, Eelke et al. (Circulation Research, 2015) Link to Published Version
Helminth-Induced Alterations Of The Gut Microbiota Exacerbate Bacterial Colitis

Su, Chienwen; Su, Libo; Li, Yali; Chang, Jeffrey; Zhang, Wei; Walker, W.A.; Xavier, Ramnik J. et al. (Mucosal immunology, 2017) Link to Published Version
Host genetic variation and its microbiome interactions within the Human Microbiome Project

Kolde, Raivo; Franzosa, Eric A.; Rahnavard, Gholamali; Hall, Andrew Brantley; Vlamakis, Hera; Stevens, Christine; Daly, Mark J. et al. (Genome Medicine, 2018) Link to Published Version
Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease

Jostins, Luke; Ripke, Stephan; Weersma, Rinse K; Duerr, Richard H; McGovern, Dermot P; Hui, Ken Y; Lee, James C et al. (Nature, 2012) Link to Published Version
The Human Cell Atlas

Regev, Aviv; Teichmann, Sarah A; Lander, Eric S; Amit, Ido; Benoist, Christophe; Birney, Ewan; Bodenmiller, Bernd et al. (eLife, 2017) Link to Published Version

Now showing items 1-20 of 40

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