Person: Kharchenko, Vasili
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Publication Comparative Analysis and Variability of the Jovian X‐Ray Spectra Detected by the Chandra and XMM‐Newton Observatories
(American Geophysical Union, 2010) Dalgarno, Alexander; Hui, Yawei; Schultz, David R.; Kharchenko, Vasili; Bhardwaj, Anil; Branduardi‐Raymont, Graziella; Stancil, Phillip C.; Cravens, Thomas E.; Lisse, Carey M.Expanding upon recent work, a more comprehensive spectral model based on charge exchange induced X‐ray emission by ions precipitating into the Jovian atmosphere is used to provide new understanding of the polar auroras. In conjunction with the Xspec spectral fitting software, the model is applied to analyze observations from both Chandra and XMM‐Newton by systematically varying the initial precipitating ion parameters to obtain the best fit model for the observed spectra. In addition to the oxygen and sulfur ions considered previously, carbon is included to discriminate between solar wind and Jovian magnetospheric ion origins, enabled by the use of extensive databases of both atomic collision cross sections and radiative transitions. On the basis of fits to all the Chandra observations, we find that carbon contributes negligibly to the observed polar X‐ray emission suggesting that the highly accelerated precipitating ions are of magnetospheric origin. Most of the XMM‐Newton fits also favor this conclusion with one exception that implies a possible carbon contribution. Comparison among all the spectra from these two observatories in light of the inferred initial energies and relative abundances of precipitating ions from the modeling show that they are significantly variable in time (observation date) and space (north and south polar X‐ray auroras).
Publication Trapping Hydrogen Atoms From a Neon-Gas Matrix: A Theoretical Simulation
(American Institute of Physics, 2009) Bovino, S.; Zhang, Peng; Kharchenko, Vasili; Dalgarno, AlexanderHydrogen is of critical importance in atomic and molecular physics and the development of a simple and efficient technique for trapping cold and ultracold hydrogen atoms would be a significant advance. In this study we simulate a recently proposed trap-loading mechanism for trapping hydrogen atoms released from a neon matrix. Accurate ab initio quantum calculations are reported of the neon-hydrogen interaction potential and the energy- and angular-dependent elastic scattering cross sections that control the energy transfer of initially cold atoms are obtained. They are then used to construct the Boltzmann kinetic equation, describing the energy relaxation process. Numerical solutions of the Boltzmann equation predict the time evolution of the hydrogen energy distribution function. Based on the simulations we discuss the prospects of the technique.
Publication Energy Relaxation In Collisions Of Hydrogen And Deuterium With Oxygen Atoms
(American Geophysical Union, 2009) Zhang, Peng; Kharchenko, Vasili; Jamieson, M.J.; Dalgarno, AlexanderCollision energy transfer processes between hydrogen, deuterium, and oxygen atoms in the upper atmospheres of the terrestrial planets are studied. A new set of interaction potentials has been constructed using an accurate ab initio method. Full orientation-dependent scattering cross sections have been obtained quantum mechanically and have been incorporated into the construction of the linear Boltzmann kinetic equation describing the energy relaxation process. The isotope and temperature dependence of the energy relaxation parameters have been analyzed. Distributions of the secondary energetic recoil atoms have been computed and the fractions of hot atoms capable of escaping from the atmospheres of the terrestrial planets have been determined. For applications to atmospheric physics and astrophysics, we have computed effective hard sphere cross sections for O + H and O + D collisions that closely reproduce the energy relaxation kinetics obtained from the linear Boltzmann equation. These effective cross sections, which are functions of the laboratory frame collisional energy and the temperature of the bath gas, may be used in simulations of the thermalization of hot O, H, and D atoms and their escape from planets.
Publication The Ion-Induced Charge-Exchange X-Ray Emission of the Jovian Auroras: Magnetospheric or Solar Wind Origin?
(American Astronomical Society, 2009) Hui, Yawei; Schultz, David R.; Kharchenko, Vasili; Stancil, Philip C.; Cravens, Thomas E.; Lisse, Carey M.; Dalgarno, AlexanderA new and more comprehensive model of charge-exchange induced X-ray emission, due to ions precipitating into the Jovian atmosphere near the poles, has been used to analyze spectral observations made by the Chandra X-ray Observatory. The model includes for the first time carbon ions, in addition to the oxygen and sulfur ions previously considered, in order to account for possible ion origins from both the solar wind and the Jovian magnetosphere. By comparing the model spectra with newly reprocessed Chandra observations, we conclude that carbon ion emission provides a negligible contribution, suggesting that solar wind ions are not responsible for the observed polar X-rays. In addition, results of the model fits to observations support the previously estimated seeding kinetic energies of the precipitating ions (~0.7-2 MeV u(^{–1})), but infer a different relative sulfur-to-oxygen abundance ratio for these Chandra observations.
Publication Energy Transfer in O Collisions with He Isotopes and Helium Escape from Mars
(Wiley-Blackwell, 2011) Bovino, S.; Zhang, Peng; Gianturco, F. A.; Dalgarno, Alexander; Kharchenko, Vasili[1] Accurate data on energy-transfer collisions between hot oxygen atoms and the atmospheric helium gas on Mars, are reported. Anisotropic cross sections for elastic collisions of O(3P) and O(1D) atoms with helium gas have been calculated quantum mechanically and found to be surprisingly similar. Cross sections, computed for collisions with both helium isotopes, 3He and 4He, have been used to construct the kernel of the Boltzmann equation describing the energy relaxation of hot oxygen atoms. Computed rates of energy transfer in O+He collisions have been used to evaluate the flux of He atoms escaping from the Mars atmosphere. Atmospheric layers mostly responsible for production of the He escape flux are identified. Our results demonstrate that strong angular anisotropy of scattering cross sections increases the collisional ejection of light atoms and is critical in the evaluation of He escape from Mars, Venus and Earth.
Publication Relaxation of energetic S(1D) atoms in Xe gas: Comparison of ab initio calculations with experimental data
(AIP Publishing, 2011) Bovino, S.; Zhang, P.; Kharchenko, Vasili; Dalgarno, AlexanderIn this paper, we report our investigation of the translational energy relaxation of fast S((1)D) atoms in a Xe thermal bath. The interaction potential of Xe-S was constructed using ab initio methods. Total and differential cross sections were then calculated. The latter have been incorporated into the construction of the kernel of the Boltzmann equation describing the energy relaxation process. The solution of the Boltzmann equation was obtained and results were compared with those reported in experiments [G. Nan, and P. L. Houston, J. Chem. Phys. 97, 7865 (1992)]. Good agreement with the measured time-dependent relative velocity of fast S((1)D) atoms was obtained except at long relaxation times. The discrepancy may be due to the error accumulation caused by the use of hard sphere approximation and the Monte Carlo analysis of the experimental data. Our accurate description of the energy relaxation process led to an increase in the number of collisions required to achieve equilibrium by an order of magnitude compared to the number given by the hard-sphere approximation.
Publication Index of refraction of molecular nitrogen for sodium matter waves
(American Physical Society (APS), 2013) Loreau, J.; Kharchenko, Vasili; Dalgarno, AlexanderWe calculate the index of refraction of sodium matter waves propagating through a gas of nitrogen molecules. We use a recent ab initio potential for the ground state of the NaN2 van der Waals complex to perform quantal close-coupling calculations and compute the index of refraction as a function of the projectile velocity. We obtain good agreement with the available experimental data. We show that the refractive index contains glory oscillations but that they are damped by the averaging over the thermal motion of the N2 molecules. These oscillations appear at lower temperatures and projectile velocity. We also investigate the behavior of the refractive index at low temperature and low projectile velocity to show its dependence on the rotational state of N2 and discuss the advantage of using diatomic molecules as projectiles.
Publication Circadian Kinetics of Cell Cycle Progression in Adult Neurogenic Niches of a Diurnal Vertebrate
(Society for Neuroscience, 2017) Akle, Veronica; Stankiewicz, Alexander J.; Kharchenko, Vasili; Yu, Lili; Kharchenko, Peter; Zhdanova, Irina V.The circadian system may regulate adult neurogenesis via intracellular molecular clock mechanisms or by modifying the environment of neurogenic niches, with daily variation in growth factors or nutrients depending on the animal's diurnal or nocturnal lifestyle. In a diurnal vertebrate, zebrafish, we studied circadian distribution of immunohistochemical markers of the cell division cycle (CDC) in 5 of the 16 neurogenic niches of adult brain, the dorsal telencephalon, habenula, preoptic area, hypothalamus, and cerebellum. We find that common to all niches is the morning initiation of G1/S transition and daytime S-phase progression, overnight increase in G2/M, and cycle completion by late night. This is supported by the timing of gene expression for critical cell cycle regulators cyclins D, A2, and B2 and cyclin-dependent kinase inhibitor p20 in brain tissue. The early-night peak in p20, limiting G1/S transition, and its phase angle with the expression of core clock genes, Clock1 and Per1, are preserved in constant darkness, suggesting intrinsic circadian patterns of cell cycle progression. The statistical modeling of CDC kinetics reveals the significant circadian variation in cell proliferation rates across all of the examined niches, but interniche differences in the magnitude of circadian variation in CDC, S-phase length, phase angle of entrainment to light or clock, and its dispersion. We conclude that, in neurogenic niches of an adult diurnal vertebrate, the circadian modulation of cell cycle progression involves both systemic and niche-specific factors. SIGNIFICANCE STATEMENT This study establishes that in neurogenic niches of an adult diurnal vertebrate, the cell cycle progression displays a robust circadian pattern. Common to neurogenic niches located in diverse brain regions is daytime progression of DNA replication and nighttime mitosis, suggesting systemic regulation. Differences between neurogenic niches in the phase and degree of S-phase entrainment to the clock suggest additional roles for niche-specific regulatory mechanisms. Understanding the circadian regulation of adult neurogenesis can help optimize the timing of therapeutic approaches in patients with brain traumas or neurodegenerative disorders and preserve neural stem cells during cytostatic cancer therapies.