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Mao, Jialin

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Mao

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Jialin

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Mao, Jialin

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1997 - 199912010 - 20112

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Author's Publications: search.filters.isAuthorOfPublication.58176ec8-1731-4721-a028-912bd76f4251

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    Chemistry of Hydrogen Oxide Radicals \((HO_x)\) in the Arctic Troposphere in Spring
    (European Geosciences Union, 2010) Mao, Jialin; Jacob, Daniel; Evans, M. J.; Olson, J. R.; Ren, X.; Brune, W. H.; St. Clair, J. M.; Crounse, J. D.; Spencer, K. M.; Beaver, M. R.; Wennberg, P. O.; Cubison, M. J.; Jimenez, J. L.; Fried, A.; Weibring, P.; Walega, J. G.; Hall, S. R.; Weinheimer, A. J.; Cohen, R. C.; Chen, G.; Crawford, J. H.; McNaughton, C.; Clarke, A. D.; Jaeglé, L.; Fisher, J. A.; Yantosca, R. M.; Le Sager, P; Carouge, C.
    We use observations from the April 2008 NASA ARCTAS aircraft campaign to the North American Arctic, interpreted with a global 3-D chemical transport model (GEOS-Chem), to better understand the sources and cycling of hydrogen oxide radicals \((HO_x≡H+OH+\)peroxy radicals) and their reservoirs \((HO_y≡HO_x+\)peroxides) in the springtime Arctic atmosphere. We find that a standard gas-phase chemical mechanism overestimates the observed \(HO_2\) and \(H_2O_2\) concentrations. Computation of \(HO_x\) and \(HO_y\) gas-phase chemical budgets on the basis of the aircraft observations also indicates a large missing sink for both. We hypothesize that this could reflect \(HO_2\) uptake by aerosols, favored by low temperatures and relatively high aerosol loadings, through a mechanism that does not produce H2O2. We implemented such an uptake of \(HO_2\) by aerosol in the model using a standard reactive uptake coefficient parameterization with \(\gamma(HO_2)\) values ranging from 0.02 at 275 K to 0.5 at 220 K. This successfully reproduces the concentrations and vertical distributions of the different \(HO_x\) species and \(HO_y\) reservoirs. \(HO_2\) uptake by aerosol is then a major \(HO_x\) and \(HO_y\) sink, decreasing mean OH and \(HO_2\) concentrations in the Arctic troposphere by 32% and 31% respectively. Better rate and product data for \(HO_2\) uptake by aerosol are needed to understand this role of aerosols in limiting the oxidizing power of the Arctic atmosphere.
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    Sources of carbonaceous aerosols and deposited black carbon in the Arctic in winter-spring: implications for radiative forcing
    (European Geosciences Union, 2011) Wang, Qiaoqiao; Jacob, Daniel; Fisher, Jenny; Mao, Jialin; Leibensperger, Eric Michael; Carouge, C. C.; Le Sager, P; Kondo, Y.; Jimenez, J. L.; Cubison, M. J.; Doherty, S. J.
    We use a global chemical transport model (GEOS-Chem CTM) to interpret observations of black carbon (BC) and organic aerosol (OA) from the NASA ARCTAS aircraft campaign over the North American Arctic in April 2008, as well as longer-term records in surface air and in snow (2007–2009). BC emission inventories for North America, Europe, and Asia in the model are tested by comparison with surface air observations over these source regions. Russian open fires were the dominant source of OA in the Arctic troposphere during ARCTAS but we find that BC was of prevailingly anthropogenic (fossil fuel and biofuel) origin, particularly in surface air. This source attribution is confirmed by correlation of BC and OA with acetonitrile and sulfate in the model and in the observations. Asian emissions are the main anthropogenic source of BC in the free troposphere but European, Russian and North American sources are also important in surface air. Russian anthropogenic emissions appear to dominate the source of BC in Arctic surface air in winter. Model simulations for 2007–2009 (to account for interannual variability of fires) show much higher BC snow content in the Eurasian than the North American Arctic, consistent with the limited observations. We find that anthropogenic sources contribute 90% of BC deposited to Arctic snow in January-March and 60% in April–May 2007–2009. The mean decrease in Arctic snow albedo from BC deposition is estimated to be 0.6% in spring, resulting in a regional surface radiative forcing consistent with previous estimates.
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    Multiplex Sequencing of 1.5 Mb of the Mycobacterium leprae Genome
    (Cold Spring Harbor Laboratory, 1997-08-01) Smith, DR; Richterich, P; Rubenfield, M; Rice, PW; Butler, Carolyn; Lee, HM; Kirst, S; Gundersen, Kathryn; Abendschan, K; Xu, Qiang; Chung, Ming-Kei; Deloughery, C; Aldredge, T; Maher, Janet; Lundstrom, R; Tulig, C; Falls, Kathleen; Imrich, Joann; Torrey, D; Engelstein, M; Breton, G; Madan, D; Nietupski, R; Seitz, B; Connelly, Sheila; McDougall, S; Safer, H; Gibson, R; Doucette-Stamm, L; Eiglmeier, K; Bergh, S; Cole, ST; Robison, K; Richterich, L; Johnson, Jacob; Church, George; Mao, Jialin
    The nucleotide sequence of 1.5 Mb of genomic DNA from Mycobacterium leprae was determined using computer-assisted multiplex sequencing technology. This brings the 2.8-Mb M. leprae genome sequence to ∼66% completion. The sequences, derived from 43 recombinant cosmids, contain 1046 putative protein-coding genes, 44 repetitive regions, 3 rRNAs, and 15 tRNAs. The gene density of one per 1.4 kb is slightly lower than that of Mycoplasma (1.2 kb). Of the protein coding genes, 44% have significant matches to genes with well defined functions. Comparison of 1157 M. leprae and 1564 Mycobacterium tuberculosis proteins shows a complex mosaic of homologous genomic blocks with up to 22 adjacent proteins in conserved map order. Matches to known enzymatic, antigenic, membrane, cell wall, cell division, multidrug resistance, and virulence proteins suggest therapeutic and vaccine targets. Unusual features of the M. leprae genome include large polyketide synthase (pks) operons, inteins, and highly fragmented pseudogenes