Person: Rice, Ken
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Publication Common Genetic Variation Near the Phospholamban Gene Is Associated with Cardiac Repolarisation: Meta-Analysis of Three Genome-Wide Association Studies
(Public Library of Science, 2009) Nolte, Ilja M.; Wallace, Chris; Newhouse, Stephen J.; Waggott, Daryl; Fu, Jingyuan; Soranzo, Nicole; Gwilliam, Rhian; Deloukas, Panos; Savelieva, Irina; Zheng, Dongling; Dalageorgou, Chrysoula; Farrall, Martin; Samani, Nilesh J.; Brown, Morris; Dominiczak, Anna; Lathrop, Mark; Zeggini, Eleftheria; Wain, Louise V.; Eijgelsheim, Mark; Pfeufer, Arne; Sanna, Serena; Arking, Dan E.; Asselbergs, Folkert W.; Spector, Tim D.; Carter, Nicholas D.; Jeffery, Steve; Tobin, Martin; Caulfield, Mark; Snieder, Harold; Munroe, Patricia B.; Jamshidi, Yalda; Connell, John; Newton-Cheh, Christopher; Rice, Ken; de Bakker, Paul; Paterson, Andrew D.To identify loci affecting the electrocardiographic QT interval, a measure of cardiac repolarisation associated with risk of ventricular arrhythmias and sudden cardiac death, we conducted a meta-analysis of three genome-wide association studies (GWAS) including 3,558 subjects from the TwinsUK and BRIGHT cohorts in the UK and the DCCT/EDIC cohort from North America. Five loci were significantly associated with QT interval at P<1×10(^{−6}). To validate these findings we performed an in silico comparison with data from two QT consortia: QTSCD (n = 15,842) and QTGEN (n = 13,685). Analysis confirmed the association between common variants near NOS1AP (P = 1.4×10(^{−83})) and the phospholamban (PLN) gene (P = 1.9×10(^{−29})). The most associated SNP near NOS1AP (rs12143842) explains 0.82% variance; the SNP near PLN (rs11153730) explains 0.74% variance of QT interval duration. We found no evidence for interaction between these two SNPs (P = 0.99). PLN is a key regulator of cardiac diastolic function and is involved in regulating intracellular calcium cycling, it has only recently been identified as a susceptibility locus for QT interval. These data offer further mechanistic insights into genetic influence on the QT interval which may predispose to life threatening arrhythmias and sudden cardiac death.
Publication The Kepler-10 planetary system revisited by HARPS-N: A hot rocky world and a solid Neptune-mass planet.
(IOP Publishing, 2014) Dumusque, Xavier; Bonomo, Aldo S.; Haywood, Raphaelle; Malavolta, Luca; Ségransan, Damien; Buchhave, Lars A.; Cameron, Andrew Collier; Latham, David; Molinari, Emilio; Pepe, Francesco; Udry, Stéphane; Charbonneau, David; Cosentino, Rosario; Dressing, Courtney Danielle; Figueira, Pedro; Fiorenzano, Aldo F. M.; Gettel, Sara; Harutyunyan, Avet; Horne, Keith; Lopez-Morales, Mercedes; Lovis, Christophe; Mayor, Michel; Micela, Giusi; Motalebi, Fatemeh; Nascimbeni, Valerio; Phillips, David; Piotto, Giampaolo; Pollacco, Don; Queloz, Didier; Rice, Ken; Sasselov, Dimitar; Sozzetti, Alessandro; Szentgyorgyi, Andrew; Watson, ChrisKepler-10b was the first rocky planet detected by the Kepler satellite and confirmed with radial velocity follow-up observations from Keck-HIRES. The mass of the planet was measured with a precision of around 30%, which was insufficient to constrain models of its internal structure and composition in detail. In addition to Kepler-10b, a second planet transiting the same star with a period of 45 days was statistically validated, but the radial velocities were only good enough to set an upper limit of 20 M ⊕ for the mass of Kepler-10c. To improve the precision on the mass for planet b, the HARPS-N Collaboration decided to observe Kepler-10 intensively with the HARPS-N spectrograph on the Telescopio Nazionale Galileo on La Palma. In total, 148 high-quality radial-velocity measurements were obtained over two observing seasons. These new data allow us to improve the precision of the mass determination for Kepler-10b to 15%. With a mass of 3.33 ± 0.49 M ⊕ and an updated radius of $1.47^{+0.03}{-0.02}$ R ⊕, Kepler-10b has a density of 5.8 ± 0.8 g cm–3, very close to the value predicted by models with the same internal structure and composition as the Earth. We were also able to determine a mass for the 45-day period planet Kepler-10c, with an even better precision of 11%. With a mass of 17.2 ± 1.9 M ⊕ and radius of $2.35^{+0.09}{-0.04}$ R ⊕, Kepler-10c has a density of 7.1 ± 1.0 g cm–3. Kepler-10c appears to be the first strong evidence of a class of more massive solid planets with longer orbital periods.