Now showing items 41-60 of 136

    • Drug Resistance Mutations for Surveillance of Transmitted HIV-1 Drug-Resistance: 2009 Update 

      Bennett, Diane E.; Camacho, Ricardo J.; Otelea, Dan; Fleury, Hervé; Kiuchi, Mark; Heneine, Walid; Kantor, Rami; Jordan, Michael R.; Schapiro, Jonathan M.; Vandamme, Anne-Mieke; Sandstrom, Paul; van de Vijver, David; Rhee, Soo-Yon; Liu, Tommy F.; Pillay, Deenan; Shafer, Robert W.; Kuritzkes, Daniel Robert; Boucher, Charles Allen (Public Library of Science, 2009)
      Programs that monitor local, national, and regional levels of transmitted HIV-1 drug resistance inform treatment guidelines and provide feedback on the success of HIV-1 treatment and prevention programs. To accurately ...
    • Dynorphin Activates Quorum Sensing Quinolone Signaling in Pseudomonas aeruginosa 

      Zaborina, Olga; Lepine, Francois; Xiao, Gaoping; Valuckaite, Vesta; Chen, Yimei; Li, Terry; Ciancio, Mae; Zaborin, Alex; Petroff, Elaine; Turner, Jerrold R; Chang, Eugene; Alverdy, John C; Rahme, Laurence G. (Public Library of Science, 2007)
      There is now substantial evidence that compounds released during host stress directly activate the virulence of certain opportunistic pathogens. Here, we considered that endogenous opioids might function as such compounds, ...
    • Efficacy of Infection Control Interventions in Reducing the Spread of Multidrug-Resistant Organisms in the Hospital Setting 

      D'Agata, Erika Maria Concetta; Horn, Mary Ann; Ruan, Shigui; Webb, Glenn F.; Wares, Joanna R. (Public Library of Science, 2012)
      Multidrug-resistant organisms (MDRO) continue to spread in hospitals globally, but the population-level impact of recommended preventive strategies and the relative benefit of individual strategies targeting all MDRO in ...
    • ElaD, a Deubiquitinating Protease Expressed by E. Coli 

      Catic, Andre; Misaghi, Shahram; Korbel, Gregory A.; Ploegh, Hidde L. (Public Library of Science, 2007)
      Background: Ubiquitin and ubiquitin-like proteins (Ubl) are designed to modify polypeptides in eukaryotes. Covalent binding of ubiquitin or Ubls to substrate proteins can be reversed by specific hydrolases. One particular ...
    • Empirical Evidence for the Effect of Airline Travel on Inter-Regional Influenza Spread in the United States 

      Wolfe, Cecily J; Galvani, Alison; Brownstein, John Samuel; Mandl, Kenneth David (Public Library of Science, 2006)
      Background: The influence of air travel on influenza spread has been the subject of numerous investigations using simulation, but very little empirical evidence has been provided. Understanding the role of airline travel ...
    • Episomal Viral cDNAs Identify a Reservoir That Fuels Viral Rebound after Treatment Interruption and That Contributes to Treatment Failure 

      Sharkey, Mark; Babic, Dunja Z.; Greenough, Thomas; Gulick, Roy; Stevenson, Mario; Cullen, Bryan R.; Kuritzkes, Daniel Robert (Public Library of Science, 2011)
      Viral reservoirs that persist in HIV-1 infected individuals on antiretroviral therapy (ART) are the major obstacle to viral eradication. The identification and definition of viral reservoirs in patients on ART is needed ...
    • Epstein–Barr Virus MicroRNAs Are Evolutionarily Conserved and Differentially Expressed 

      Cai, Xuezhong; Schäfer, Alexandra; Lu, Shihua; Bilello, John P; Desrosiers, Ronald C.; Edwards, Rachel; Raab-Traub, Nancy; Cullen, Bryan R (Public Library of Science, 2006)
      The pathogenic lymphocryptovirus Epstein–Barr virus (EBV) is shown to express at least 17 distinct microRNAs (miRNAs) in latently infected cells. These are arranged in two clusters: 14 miRNAs are located in the introns of ...
    • EspA Acts as a Critical Mediator of ESX1-Dependent Virulence in Mycobacterium tuberculosis by Affecting Bacterial Cell Wall Integrity 

      Garces, Alejandra; Woodworth, Joshua S.; Krastins, Bryan; Atmakuri, Krishnamohan; Chase, Michael Richard; Rothchild, Alissa C.; Ramsdell, Talia Lynn; Lopez, Mary Frances; Behar, Samuel M; Sarracino, David A.; Fortune, Sarah Merritt (Public Library of Science, 2010)
      Mycobacterium tuberculosis (Mtb) requires the ESX1 specialized protein secretion system for virulence, for triggering cytosolic immune surveillance pathways, and for priming an optimal CD8+ T cell response. This suggests ...
    • Excess circulating angiopoietin-2 may contribute to pulmonary vascular leak in sepsis in humans 

      Parikh, Samir Mukund; Mammoto, Tadanori; Schultz, Aylit; Yuan, Hai-Tao; Christiani, David C.; Karumanchi, Subbian Ananth; Sukhatme, Vikas Pandurang (Public Library of Science, 2006)
      Background: Acute respiratory distress syndrome (ARDS) is a devastating complication of numerous underlying conditions, most notably sepsis. Although pathologic vascular leak has been implicated in the pathogenesis of ARDS ...
    • Explaining Adherence Success in Sub-Saharan Africa: An Ethnographic Study 

      Idoko, John; Kaaya, Sylvia; Biraro, Irene Andia; Agbaji, Oche; Beyrer, Chris; Ware, Norma Clara; Wyatt, Monique A.; Chalamilla, Guerino E.; Bangsberg, David Roy (Public Library of Science, 2009)
      Background: Individuals living with HIV/AIDS in sub-Saharan Africa generally take more than 90% of prescribed doses of antiretroviral therapy (ART). This number exceeds the levels of adherence observed in North America and ...
    • Factors Predicting Discordant Virological and Immunological Responses to Antiretroviral Therapy in HIV-1 Clade C Infected Zulu/Xhosa in South Africa 

      Julg, Boris; Poole, Danielle; Ghebremichael, Musie Syum; Castilla, Carmen; Altfeld, Marcus; Sunpath, Henry; Murphy, Richard A.; Walker, Bruce David (Public Library of Science, 2012)
      Factors predicting suboptimal CD4 cell recovery have been studied in HIV clade-B infected US and European populations. It is, however, uncertain to what extent these results are applicable to HIV clade-C infected African ...
    • Flagellin-Deficient Legionella Mutants Evade Caspase-1- and Naip5-Mediated Macrophage Immunity 

      Ren, Tao; Zamboni, Dario S.; Roy, Craig R.; Dietrich, William F.; Vance, Russell E. (Public Library of Science, 2006)
      Macrophages from C57BL/6J (B6) mice restrict growth of the intracellular bacterial pathogen Legionella pneumophila. Restriction of bacterial growth requires caspase-1 and the leucine-rich repeat-containing protein Naip5 ...
    • A Full-Genomic Sequence-Verified Protein-Coding Gene Collection for Francisella tularensis 

      Murthy, Tal; Raphael, Jacob; Moreira, Donna; Kelley, Fontina; Taycher, Elena; Brizuela, Leonardo; LaBaer, Joshua; Petrosino, Joseph; Rolfs, Andreas; Hu, Yanhui; McCarron, Seamus; Zuo, Dongmei; Shi, Zhenwei; Jepson, Daniel Ashley; Mohr, Stephanie; Fernandez, Mauricio J. (Public Library of Science, 2007)
      The rapid development of new technologies for the high throughput (HT) study of proteins has increased the demand for comprehensive plasmid clone resources that support protein expression. These clones must be full-length, ...
    • A Functional Genomic Yeast Screen to Identify Pathogenic Bacterial Proteins 

      Slagowski, Naomi L; Kramer, Roger W; Morrison, Monica F; LaBaer, Joshua; Lesser, Cammie (Public Library of Science, 2008)
      Many bacterial pathogens promote infection and cause disease by directly injecting into host cells proteins that manipulate eukaryotic cellular processes. Identification of these translocated proteins is essential to ...
    • Haematological Safety of Perinatal Zidovudine in Pregnant HIV-1–Infected Women in Thailand: Secondary Analysis of a Randomized Trial 

      Briand, Nelly; Lallemant, Marc Jean; Jourdain, Gonzague Joseph Albert; Techapalokul, Somnuek; Tunthanathip, Preecha; Suphanich, Surachet; Chanpoo, Truengta; Traisathit, Patrinee; McIntosh, Kenneth; Coeur, Sophie Le (Public Library of Science, 2007)
      Objectives: To respond to the primary safety objective of the Perinatal HIV Prevention Trial 1 (PHPT-1) by studying the evolution of haematological parameters according to zidovudine exposure duration in HIV-1−infected ...
    • Has the DOTS Strategy Improved Case Finding or Treatment Success? An Empirical Assessment 

      Obermeyer, Ziad; Abbott-Klafter, Jesse; Murray, Christopher J. L. (Public Library of Science, 2008)
      Background: Nearly fifteen years after the start of WHO's DOTS strategy, tuberculosis remains a major global health problem. Given the lack of empirical evidence that DOTS reduces tuberculosis burden, considerable debate ...
    • Heterogeneity in Macrophage Phagocytosis of Staphylococcus aureus Strains: High-Throughput Scanning Cytometry-Based Analysis 

      Sulahian, Timothy H.; Imrich, Amy; Deloid, Glen M; Kobzik, Lester (Public Library of Science, 2009)
      Alveolar macrophages (AMs) can phagocytose unopsonized pathogens such as S. aureus via innate immune receptors, such as scavenger receptors (SRs). Cytoskeletal events and signaling pathways involved in phagocytosis of ...
    • The Hexamer Structure of the Rift Valley Fever Virus Nucleoprotein Suggests a Mechanism for its Assembly into Ribonucleoprotein Complexes 

      Danek, Eric I.; Luo, Dahai; Wong, Yeehwa; Coutard, Bruno; Lantez, Violaine; Canard, Bruno; Lescar, Julien; Ferron, François; Charrel, Rémi; Li, Zongli; Walz, Thomas (Public Library of Science, 2011)
      Rift Valley fever virus (RVFV), a Phlebovirus with a genome consisting of three single-stranded RNA segments, is spread by infected mosquitoes and causes large viral outbreaks in Africa. RVFV encodes a nucleoprotein (N) ...
    • A High-Throughput Screen Identifies a New Natural Product with Broad-Spectrum Antibacterial Activity 

      Ymele-Leki, Patrick; Cao, Shugeng; Sharp, Jared D'Alonzo; Lambert, Kathleen G; McAdam, Alexander John; Husson, Robert N; Tamayo, Giselle; Clardy, Jon C.; Watnick, Paula Ivonne (Public Library of Science, 2012)
      Due to the inexorable invasion of our hospitals and communities by drug-resistant bacteria, there is a pressing need for novel antibacterial agents. Here we report the development of a sensitive and robust but low-tech and ...
    • HLA Alleles Associated with Delayed Progression to AIDS Contribute Strongly to the Initial CD8+ T Cell Response against HIV-1 

      Kalife, Elizabeth T; Qi, Ying; Johnston, Mary N; Burgett, Nicole; Swartz, Martha E; Yang, Amy; Rockstroh, Juergen K; Jessen, Heiko; Carrington, Mary; Altfeld, Marcus; Streeck, Hendrik; Lichterfeld, Mathias; Alter, Galit; Yu, Xu; Meier, Angela; Allen, Todd; Rosenberg, Eric Scott; Walker, Bruce David (Public Library of Science, 2006)
      Background: Very little is known about the immunodominance patterns of HIV-1-specific T cell responses during primary HIV-1 infection and the reasons for human lymphocyte antigen (HLA) modulation of disease progression. ...