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Genetic and Functional Studies of Non-Coding Variants in Human Disease
(2013-03-08)
Genome-wide association studies (GWAS) of common diseases have identified hundreds of genomic regions harboring disease-associated variants. Translating these findings into an improved understanding of human disease requires ...
The Cell Cycle and Differentiation in Stem Cells
(2013-03-08)
The relationship between cellular proliferation and differentiation is a major topic in cell biology. What we know comes from models of somatic cell differentiation, where it is widely viewed that cycling and differentiation ...
Toward Multiplex Genome Engineering in Mammalian Cells
(2013-10-18)
Given the explosion in human genetic data, new high-throughput genetic methods are necessary for studying variants and elucidating their role in human disease. In Chapter I, I will expand on this concept and describe ...
Personal Genomics and Mitochondrial Disease
(2013-09-30)
Mitochondrial diseases involving dysfunction of the respiratory chain are the most common inborn errors of metabolism. Mitochondria are found in all cell types besides red blood cells; consequently, patients can present ...
Functional Studies of Candidate Oncogenes in Non-Small Cell Lung Cancer
(2013-10-17)
Cancer is a set of complex genetic diseases driven by diverse genomic alterations. The genomic study of cancer has enabled the discovery of novel, targetable events in almost all cancer types and in turn, has led to the ...
Analysis of Transcription Activation Distance as a Polygenic Trait in Saccharomyces cerevisiae
(2013-10-14)
Much of the eukaryotic transcriptional machinery is conserved from yeast to human. However, the distance over which transcriptional activation can occur differs between Saccharomyces cerevisiae and metazoans. In S. ...
Single-Neuron Sequencing to Explore Somatic Genetic Variants in Normal and Pathological Human Brain Development
(2013-09-30)
The human brain is one of the most exquisite structures in nature, featuring extreme functional complexity and capacities that allow for advanced cognitive abilities. During the development of the human brain, neural ...
Methods for comprehensive transcriptome analysis using next-generation sequencing and application in hypertrophic cardiomyopathy
(2013-10-08)
Characterization of the RNA transcriptome by next-generation sequencing can produce an unprecedented yield of information that provides novel biologic insights. I describe four approaches for sequencing different aspects ...
Single-cell Sequencing Studies of Somatic Mutation in the Human Brain
(2013-10-08)
A major unanswered question in neuroscience is whether there exists genomic variability between individual neurons of the brain, contributing to functional diversity or to an unexplained burden of neurologic disease. To ...
Genetic Study of Population Mixture and Its Role in Human History
(2013-09-25)
Mixture between populations is an evolutionary process that shapes genetic variation. Intermixing between groups of distinct ancestries creates mosaics of chromosomal segments inherited from multiple ancestral populations. ...